The PhenoCycler Assay

Spatial Discoveries Simplified

Introducing PhenoCode Discovery Panels

Simplify your spatial biology journey through the ever-expanding biomarker landscape with PhenoCode Discovery Panels.

PhenoCycler - Reagents & Antibodies

The PhenoCyler® solution is a complete suite of antibodies and reagents optimized and validated for use with the PhenoCycler system. We also offer an ever-expanding menu of antibodies that includes essential immune markers. Users have the flexibility to create panels from ready-to-use PhenoCycler inventoried antibodies that have been validated for use across multiple tissue types including, but not limited to, mouse fresh-frozen, human fresh-frozen, and human formalin-fixed paraffin-embedded (FFPE). Custom conjugation kits are also available for labeling antibodies with PhenoCycler barcodes. PhenoCylcer barcodes allow for easy conjugation of antibodies, while the PhenoCycler Reporters are Fluorophore-conjugated oligonucleotides that visualize the antibodies.
Akoya-Kit-Transparent-Backg

Kits & Reagents

Buffers and reagents for tissue staining, custom conjugations and performing PhenoCycler experiments
CODEX-Antibodies

PhenoCycler Antibodies

A comprehensive menu of pre-conjugated, pre-screened, and pathologist reviewed antibodies
CODEX-Barcodes

PhenoCycler Barcodes

Modified oligonucleotides for easy conjugation of custom PhenoCycler antibodies
CODEX-Reporters

PhenoCycler Reporters

Fluorophore-conjugated oligonucleotides for visualization of PhenoCycler antibodies

Kits & Reagents

The PhenoCycler System requires specially formulated reagents and buffers for tissue staining with PhenoCycler antibodies and running iterative imaging cycles. For each imaging cycle, three PhenoCycler reporters, each with a spectrally distinct dye, are applied to the stained tissue to visualize the corresponding PhenoCycler antibody. The PhenoCycler instrument applies gentle wash steps to remove the PhenoCycler reporters without any chemical modifications, followed by applying the next set of Reporters to visualize the next set of PhenoCycler antibodies.

Catalog #
Product
Size
Storage Buffer for PhenoCycler
120 milliliters
Flow Cell 2pk for PhenoCycler-Fusion
2 flow cells
Flow Cell 10pk for PhenoCycler-Fusion
10 Flow Cells
10X Buffer for PhenoCycler
10 reactions
Assay Reagent for PhenoCycler
10 reactions
Nuclear Stain for PhenoCycler
10 reactions
Coverslips for PhenoCycler
138 coverslips 
96 well plates for PhenoCycler
10 plates 
96 well plate seals for PhenoCycler
10 plate seals 
Staining Kit for PhenoCycler
10 reactions
Antibody Conjugation Kit
10 reactions
Gaskets for PhenoCycler
10 gaskets
Coverslip Storage Box for PhenoCycler
1 storage box  
Sample Kit for PhenoCycler-Fusion
10 reactions
10X Buffer Kit for PhenoCycler-Fusion
10 reactions

PhenoCycler Antibodies

PhenoCycler antibodies are provided individually and can be tailored to design panels for the simultaneous analysis of100+ biomarkers. Akoya provides fully validated PhenoCycler antibodies and a list of supplemental antibodies that have undergone varying levels of testing.

PhenoCycler Inventoried Antibodies

PhenoCycler inventoried antibodies are supplied by Akoya and have passed the PhenoCycler antibody validation process and manufacturing quality control. Our inventoried antibodies are also fully supported by our field support team.

PhenoCode Discovery Panel modules are sets of PhenoCycler antibodies and reporters that have been validated to work together on control tissue and cancer tissue. These panel modules can be supplemented with other PhenoCycler antibodies.

Catalog #
Product
Size
PhenoCode Discovery Immune Profiling Human Protein Core
25 tests

PhenoCycler antibodies have been tested in multiple types of human FFPE tissue and are conjugated to a distinct PhenoCycler Barcode (BX000). Twenty-five (25) test scan be performed with each kit.

Catalog #
Product
Size
Anti-Hu ATM(AKYP0122)-BX083—Atto 550 for PhenoCycler
25 tests
Anti-Hu b-Catenin1(AKYP0068)-BX020—Atto 550 for PhenoCycler
25 tests
Anti-Hu b-Catenin1(AKYP0068)-BX096—Atto 550 for PhenoCycler
25 tests
Anti-Hu Bcl-2(AKYP0120)-BX085—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu Bcl-2(AKYP0120)-BX085—Atto 550 for PhenoCycler
25 tests
Anti-Hu Beta-actin(AKYP0072)-BX010—Alexa Fluor™ 488 for PhenoCycler
25 tests
Anti-Hu Beta-actin(AKYP0072)-BX010—Alexa Fluor™ 750 for PhenoCycler
25 tests
Anti-Hu Beta-actin(AKYP0072)-BX117—Alexa Fluor™ 488 for PhenoCycler
25 tests
'Anti-Hu Beta-actin(AKYP0072)-BX117—Alexa Fluor™ 750 for PhenoCycler
25 tests
Anti-Hu Caveolin(AKYP0115)-BX086—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu Caveolin(AKYP0115)-BX086—Alexa Fluor™ 750 for PhenoCycler
25 tests
Anti-Hu CD3e(AKYP0062)-BX045—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu CD3e(AKYP0062)-BX080—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu CD4(AKYP0048)-BX003—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu CD8(AKYP0028)-BX026—Atto 550 for PhenoCycler
25 tests
Anti-Hu CD11c(AKYP0051)-BX024—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu CD14(AKYP0079)-BX037—Atto 550 for PhenoCycler
25 tests
Anti-Hu CD20(AKYP0049)-BX007—Alexa Fluor™ 488 for PhenoCycler
25 tests
Anti-Hu CD20(AKYP0049)-BX007—Alexa Fluor™ 750 for PhenoCycler
25 tests
Anti-Hu CD20(AKYP0049)-BX064—Alexa Fluor™ 750 for PhenoCycler
25 tests
Anti-Hu CD21(AKYP0061)-BX032—Atto 550 for PhenoCycler
25 tests
Anti-Hu CD31(AKYP0047)-BX001—Alexa Fluor™ 488 for PhenoCycler
25 tests
Anti-Hu CD31(AKYP0047)-BX001—Alexa Fluor™ 750 for PhenoCycler
25 tests
Anti-Hu CD34(AKYP0088)-BX025—Atto 550 for PhenoCycler
25 tests
Anti-Hu CD38(AKYP0110)-BX089—Atto 550 for PhenoCycler
25 tests
Anti-Hu CD39(AKYP0107)-BX099—Atto 550 for PhenoCycler
25 tests
Anti-Hu CD40(AKYP0095)-BX010—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu CD44(AKYP0073)-BX005—Atto 550 for PhenoCycler
25 tests
Anti-Hu CD45(AKYP0074)-BX021—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu CD45(AKYP0074)-BX021—Atto 550 for PhenoCycler
25 tests
Anti-Hu CD45RO(AKYP0059)-BX017—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu CD45RO(AKYP0059)-BX017—Atto 550 for PhenoCycler
25 tests
Anti-Hu CD56(AKYP0118)-BX028—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu CD56(AKYP0118)-BX028—Atto 550 for PhenoCycler
25 tests
Anti-Hu CD66(AKYP0080)-BX016—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu CD68(AKYP0050)-BX015—Alexa Fluor™ 647 for PhenoCycle
25 tests
Anti-Hu CD79a(AKYP0109)-BX090—Alexa Fluor™ 750 for PhenoCycler
25 tests
Anti-Hu CD107a(AKYP0004)-BX006—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu CD141(AKYP0124)-BX087—Atto 550 for PhenoCycler
25 tests
Anti-Hu CD163(AKYP0114)-BX069—Atto 550 for PhenoCycler
25 tests
Anti-Hu Collagen IV(AKYP0083)-BX042—Alexa Fluor™ 647
25 tests
Anti-Hu E-cadherin(AKYP0057)-BX014—Atto 550 for PhenoCycler
25 tests
Anti-Hu EpCAM(AKYP0119)-BX091—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu EpCAM(AKYP0119)-BX091—Alexa Fluor™ 750 for PhenoCycler
25 tests
Anti-Hu ER(AKYP0105)-BX084—Atto 550 for PhenoCycler
25 tests
Anti-Hu FOXP3(AKYP0102)-BX031—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu GATA3(AKYP0116)-BX049—Atto 550 for PhenoCycler
25 tests
Anti-Hu GP100(AKYP0123)-BX094—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu GP100(AKYP0123)-BX094—Atto 550 for PhenoCycler
25 tests
Anti-Hu Granzyme B(AKYP0086)-BX041—Atto 550 for PhenoCycler
25 tests
Anti-Hu HIF1A(AKYP0100)-BX062—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu Histone H3 Phospho (Ser28)(AKYP0060)-BX030—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu HLA-A(AKYP0078)-BX004—Alexa Fluor™ 750 for PhenoCycler
25 tests
Anti-Hu HLA-A(AKYP0078)-BX029—Atto 550 for PhenoCycler
25 tests
Anti-Hu HLA-DR(AKYP0063)-BX033—Alexa Fluor™ 647 for PhenoCycler
25 tests
'Anti-Hu HLA-DR(AKYP0063)-BX033—Alexa Fluor™ 750 for PhenoCycler
25 tests
Anti-Hu HLA-E(AKYP0096)-BX034—Atto 550 for PhenoCycler
25 tests
Anti-Hu ICOS(AKYP0090)-BX054—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu IDO1(AKYP0084)-BX027—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu IFNG(AKYP0093)-BX020—Atto 550 for PhenoCycler
25 tests
Anti-Hu iNOS(AKYP0104)-BX023—Atto 550 for PhenoCycler
25 tests
Anti-Hu Keratin 5(AKYP0121)-BX101—Atto 550 for PhenoCycler
25 tests
Anti-Hu Keratin 5(AKYP0121)-BX101—Alexa Fluor™ 750 for PhenoCycler
25 tests
Anti-Hu Keratin 8/18(AKYP0112)-BX081—Alexa Fluor™ 750 for PhenoCycler
25 tests
Anti-Hu Keratin 8/18(AKYP0112)-BX081—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu Keratin 14(AKYP0064)-BX002—Atto 550 for PhenoCycler
25 tests
Anti-Hu/Mu Ki67(AKYP0052)-BX047—Alexa Fluor™ 750 for PhenoCycler
25 tests
Anti-Hu/Mu Ki67(AKYP0052)-BX047—Atto 550 for PhenoCycler
25 tests
Anti-Hu LAG3(AKYP0089)-BX055—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu LIF(AKYP0065)-BX006—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu LIF(AKYP0065)-BX104—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu Mac2/Galectin-3(AKYP0067)-BX035—Atto 550 for PhenoCycler
25 tests
Anti-Hu MPO(AKYP0113)-BX098—Atto 550 for PhenoCycler
25 tests
Anti-Hu Pan-Cytokeratin(AKYP0053)-BX019—Alexa Fluor™ 488 for PhenoCycler
25 tests
Anti-Hu Pan-Cytokeratin(AKYP0053)-BX019—Alexa Fluor™ 750 for PhenoCycler
25 tests
'Anti-Hu Pan-Cytokeratin(AKYP0053)-BX066—Alexa Fluor™ 750 for PhenoCycler
25 tests
Anti-Hu PCNA(AKYP0085)-BX036—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu PD-1(AKYP0070)-BX046—Alexa Fluor™ 647 for PhenoCycler
25 tests
Anti-Hu PD-L1(AKYP0103)-BX043—Alexa Fluor™ 647 for PhenoCycler